Redacted excerpt; full evidence withheld.

$ pwd; id -u; python3 --version; git status --short; ls -la; sed -n '1,240p' README.md
exit: 0
dence figures](https://github.com/openvax/isovar/blob/master/docs/visualization.md) | `isovar plot`, how to read its figures, and the osteosarc gallery |
| [Adapter and poly-A trimming](https://github.com/openvax/isovar/blob/master/docs/read-end-inference.md) | Opt-in annotation and trimming of technical read ends |
| [Base-quality evidence](https://github.com/openvax/isovar/blob/master/docs/base-quality.md) | Optional focal-allele quality categories reported alongside raw counts |
| [Partial-read support](https://github.com/openvax/isovar/blob/master/docs/partial-read-support.md) | Fractional support scores that divide each fragment among compatible hypotheses |
| [Cell/UMI evidence](https://github.com/openvax/isovar/blob/master/docs/cell-umi-evidence.md) | Cell barcode and UMI labels behind small-variant alleles and SV support |

**Structural variants and fusions**

| Guide | What it covers |
|---|---|
[excerpt truncated]